National Cancer Institute at the National Institutes of Health (www.cancer.gov)

TARGET Data Matrix

Version 4.0 (August 2013) Version History
If you have trouble viewing this site properly in Internet Explorer, please turn off Compatibility View
TARGET Banner
Disease Patient
Data
Gene
Expression
Copy
Number
Methylation miRNA Sequence Other
Acute Lymphoblastic Leukemia (ALL)
Acute
Lympho-
blastic
Leukemia
(ALL)
Phase I
Clinical
File


Case
Matrix
Affymetrix
U133 Plus 2
DCC Open*
Affymetrix
SNP 500K

DCC Open*
DCC Controlled†














Whole
Genome
DCC Controlled†
NCBI SRA†

Whole
Genome Lite
NCBI SRA†

mRNA-seq

DCC Open*
DCC Controlled†
NCBI SRA†

Targeted Re-
sequencing

Kinome

Acute
Lympho-
blastic
Leukemia
(ALL)
Phase II
Clinical
File


Case
Matrix
Affymetrix
U133 Plus 2
Affymetrix
SNP 6.0
HELP
Methylation






Whole
Genome
NCBI SRA†

Exome

NCBI SRA†

mRNA-seq

NCBI SRA†













Acute Myeloid Leukemia (AML)
Acute
Myeloid
Leukemia
(AML)
Clinical
File


Case
Matrix
Affymetrix
Gene ST
Affymetrix
SNP 6.0
Illumina
Infinium 27K
miRNA-seq

Whole
Genome
NCBI SRA†

Exome

NCBI SRA†

mRNA-seq

NCBI SRA†













Acute
Myeloid
Leukemia
Induction
Failure (AML-IF)
Clinical
File


Case
Matrix
mRNA-seq

NCBI SRA†

Whole
Genome
NCBI SRA†







miRNA-seq

Whole
Genome
NCBI SRA†







mRNA-seq

NCBI SRA†













Kidney Tumors
High-Risk
Wilms
Tumor (WT)
Clinical
File


Case
Matrix
Affymetrix
U133 Plus 2


Affymetrix
SNP 6.0


Illumina
Infinium 450K









Whole
Genome


NCBI SRA†

Exome


NCBI SRA†

mRNA-seq


NCBI SRA†















Clear Cell
Sarcoma
of the Kidney
(CCSK)
Clinical
File


Case
Matrix
Affymetrix
U133 Plus 2


Affymetrix
SNP 6.0


Illumina
Infinium 450K









Whole
Genome


NCBI SRA†





























Rabdoid
Tumor
(RT)
Clinical
File


Case
Matrix
mRNA-seq


NCBI SRA†

Whole
Genome


NCBI SRA†

Methyl-seq


miRNA-seq


Whole
Genome


NCBI SRA†








mRNA-seq


NCBI SRA†








ChIP-seq


Neuroblastoma (NBL)
Neuro-
blastoma
(NBL)
Clinical
File


Case
Matrix
Affymetrix
HumanExon
1.0 ST v2
DCC Controlled†
Illumina
550K SNP


DCC Controlled†
Illumina
Infinium
450K






Whole
Genome


NCBI SRA†

Exome


NCBI SRA†

mRNA-seq


NCBI SRA†

Targeted Re-
sequencing










Osteosarcoma (OS)
Osteo-
sarcoma
(OS)
Clinical
File


Case
Matrix
Affymetrix
HumanExon
1.0 ST
Affymetrix
SNP 6.0


Illumina
Infinium
450K

MegaPlex
TaqMan






Whole
Genome


NCBI SRA†

Exome


NCBI SRA†

mRNA-seq


NCBI SRA†















TARGET Data Legend
Blue: Public*
Red: Protected†
Black: Unavailable
All DCC Controlled† access links require an NCI account
All NCBI SRA† are controlled access links and require an eRA Commons account